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Agenda

We will attempt to cover each of these Content pages during the workshop.

As we run out of time for each section, you may need to complete the material self-paced as homework after the in-person sessions end each day.


Zoom Info:

URL Meeting ID Password
Zoom US 812 0462 6687 cyverse

Day 1 2020-11-05

Time (AZT MST) Activity Lead Personnel Content Additional Links
0900-0910 Briefing Tyson Overview of course materials This website
0910-0930 CyVerse walkthrough Tyson Discovery Environment Overview https://de.cyverse.org
0930-0935 Launching an application Tyson Visual Interactive Computing  
0935-1000 Managing your code for reproducibility Tyson Version Control with GitHub  
1000-1010 Break      
1010-1100 Intro to NEON Data API Donal Download and Explore NEON Data https://www.neonscience.org/download-explore-neon-data
1100-1200 Brunch, Early-, Regular-, Late- Lunch Break   Eat. Chat.  
1200-1250 RStudio Activity Donal Accessing and working with NEON geolocation data https://www.neonscience.org/neon-spatial-data-basics
1250-1300 Break      
1300-1330 RStudio Activity (cont.) Tyson RStudio & Shiny Apps GitHub CyVerse NEON Shiny App
1330-1350 Data Management Tyson Managing data in the cloud  
1350-1400 Wrap-up   After-action review (what went well, wrong, could be done better)  

Day 2 2020-11-06

Time (AZT MST) Activity Lead Personnel Content Links
0900-0910 Briefing Tyson Overview of course materials This website
0910-1000 RStudio Activity Donal Creating a Canopy Height Model from lidar-derived rasters https://www.neonscience.org/create-chm-rasters-r
1000-1010 Break      
1010-1100 RStudio Activity Donal Calculating Forest Structural Diversity Metrics from NEON lidar data https://www.neonscience.org/structural-diversity-discrete-return
Optional: RStudio Activity Donal NEON AOP lidar w/ gedi https://katharynduffy.github.io/neon-aop.html#matching-gedi-waveforms-with-neon-aop-lidar-pointclouds
1100-1200 Brunch, Early-, Regular-, Late- Lunch Break Eat. Chat.    
1200-1250 RStudio Activity Donal Introduction to Hyperspectral Remote Sensing Data https://www.neonscience.org/intro-hsi-r-series
1250-1300 Break      
1300-1350 RStudio Activity   Free time to explore tools, ask questions.  
1350-1400 Wrap-up   After-action review (what went well, wrong, could be done better)  

Day 3 2020-11-07

Time (AZT MST) Activity Lead Personnel Content Links
0900-0910 Briefing   Overview of course materials This website
0910-09:30 Jupyter, Remote Desktops Tyson More on VICE apps in Discovery Environment  
0930-1000 Jupyter Lab Bridget NEON data API in Python Introduction to NEON Data API in Python
1000-1010 Break      
1010-1100 Jupyter Lab Bridget Working with NEON Hyperspectral  
1100-1200 Brunch, Early-, Regular-, Late- Lunch Break Eat. Chat.    
1200-1250 Remote Desktops Tyson QGIS and Desktops  
1250-1300 Break      
1300-1350 Batch processing lidar Tyson PDAL and Entwine Point Tiles  
1350-1400 Wrap-up   After-action review (what went well, wrong, could be done better)  

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